There are many different way to cap a stump, the main object being to avoid bar pinch from the weight of the stump sitting down on the bar and chain.
One method is to start a low/flat/level cut across the stump. Once you are far enough in start a wedge behind it. This will hold up the cut portion of the stump until you drive the bar all the way through to finnish the cut. As you finnish the cut the stump will sit down on the bar, you will have to roll it off. If the stump is big enough to can place multiple wedges behind the saw as you go, this will allow you to finnish the cut with no pinch.
Here is the method I like. Start the cut just like the first method and set the wedge. When you are almost through, pull the saw out of the cut and make a cut at a steep down angle to meet your first cut. Set the saw down and roll the stump off, then go back and finnish flush cutting the little "backrest" you left. This only requires 1 wedge.
You can do it without wedges too. Cut 2/3 of the way through or so until the bar starts to pinch then pull it out and make your steep angle cut down to it, roll it off, and flush cut the backrest. I call it a chair cut. This just takes more cutting.
Either way, the goal is to minimize or eliminate bar pinch from the weight of the stump by using wedges or cutting methods.