I am a little fuzzy on how you determined that they were not running true.
I may be very wrong and would like to know if I am but I think your over complicating it. As I said there is already some play in the system anyway. My 2 cents.
The runout is pretty evident when spinning the crank, though does seem to have diminished somewhat after a few good whacks as
suggested to seat the crank in the bearings better. But it's still there. You may be right and it'll fly just fine, but it is the clutch side toward the end of the crank where the notoriously cheesy little needle cage tends to explode even when it's having a good day according to most folks. I shot a short video of it last night, but haven't figured out how to upload it anywhere yet to link to it. I do intend to upgrade the bearing/drum setup, but don't want to trash whatever ends up being their.
And I only noticed it on the one crank. But if they're both out of their cases with no bearings on em, what the hell...may as well have em both checked while I'm at it. Unfortunately, the one I'm concerned about was just re-installed by someone else with new bearings. Don't want to screw them up too and will hope like hell they stay put in the case halves if I actually do split em again.
I just have a bad feeling about this either way I decide to go...
Poge